Ondex - data integration and visualisation

Data formats

Import

This is a list of data formats which have parsers available within the Ondex system.

Generic Parsers:

Fasta
GO (OBO 1.2)
PSI MI (version 2.5)
SBML
GAF (version 2.0)
OrthoXML (version 0.2)
Tab-delimited

Database/tool-specific Parsers:

Export

This is a list of data formats which the Ondex system can export to.

Network Data Export:

DOT
GraphML
Prolog
SBML (limited functionality)
Tab

Graphics Export:

BMP
EPS
JPEG
PDF
PNG
SVG